Package: deeppicker 0.5

Colin Smith

deeppicker: R Interface to DEEP Picker for One- and Two-Dimensional Peak Picking

Provides an R interface to the DEEP Picker neural-network peak-picking tools for one- and two-dimensional NMR spectra. The package wraps the peak-picking engines, returning peak positions, intensities, line-shape parameters, and confidence scores. It also includes readers for supported spectrum formats, including NMRPipe, Sparky, TopSpin ASCII, JSON, CSV, and ldw files, so spectra can be imported and processed directly.

Authors:Colin Smith [aut, cre], Da-Wei Li [aut], Rafael Brüschweiler [aut]

deeppicker_0.5.tar.gz
deeppicker_0.5.zip(r-4.7-x86_64)deeppicker_0.5.zip(r-4.6-x86_64)deeppicker_0.5.zip(r-4.5-x86_64)
deeppicker_0.5.tgz(r-4.6-x86_64)deeppicker_0.5.tgz(r-4.6-arm64)deeppicker_0.5.tgz(r-4.5-x86_64)deeppicker_0.5.tgz(r-4.5-arm64)
deeppicker_0.5.tar.gz(r-4.7-arm64)deeppicker_0.5.tar.gz(r-4.7-x86_64)deeppicker_0.5.tar.gz(r-4.6-arm64)deeppicker_0.5.tar.gz(r-4.6-x86_64)
deeppicker_0.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
deeppicker/json (API)

# Install 'deeppicker' in R:
install.packages('deeppicker', repos = c('https://smith-group.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/smith-group/deeppicker/issues

Pkgdown/docs site:https://smith-group.github.io

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

cpp

1.70 score 4 exports 2 dependencies

Last updated from:4ca92958f3. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK163
linux-devel-x86_64OK162
source / vignettesOK201
linux-release-arm64OK158
linux-release-x86_64OK173
macos-release-arm64OK121
macos-release-x86_64OK408
macos-oldrel-arm64OK122
macos-oldrel-x86_64OK226
windows-develOK146
windows-releaseOK168
windows-oldrelOK163
wasm-releaseOK135

Exports:deep_pickerdeep_picker_1dread_spectrum_1dread_spectrum_2d

Dependencies:RcppRcppEigen