Package: deeppicker 0.5

Colin Smith

deeppicker: R Interface to DEEP Picker for One- and Two-Dimensional Peak Picking

Provides an R interface to the DEEP Picker neural-network peak-picking tools for one- and two-dimensional NMR spectra. The package wraps the peak-picking engines, returning peak positions, intensities, line-shape parameters, and confidence scores. It also includes readers for supported spectrum formats, including NMRPipe, Sparky, TopSpin ASCII, JSON, CSV, and ldw files, so spectra can be imported and processed directly.

Authors:Colin Smith [aut, cre], Da-Wei Li [aut], Rafael Brüschweiler [aut]

deeppicker_0.5.tar.gz
deeppicker_0.5.zip(r-4.7-x86_64)deeppicker_0.5.zip(r-4.7-arm64)deeppicker_0.5.zip(r-4.6-x86_64)deeppicker_0.5.zip(r-4.6-arm64)deeppicker_0.5.zip(r-4.5-x86_64)
deeppicker_0.5.tgz(r-4.6-x86_64)deeppicker_0.5.tgz(r-4.6-arm64)deeppicker_0.5.tgz(r-4.5-x86_64)deeppicker_0.5.tgz(r-4.5-arm64)
deeppicker_0.5.tar.gz(r-4.7-arm64)deeppicker_0.5.tar.gz(r-4.7-x86_64)deeppicker_0.5.tar.gz(r-4.6-arm64)deeppicker_0.5.tar.gz(r-4.6-x86_64)
deeppicker_0.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
deeppicker/json (API)

# Install 'deeppicker' in R:
install.packages('deeppicker', repos = c('https://smith-group.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/smith-group/deeppicker/issues

Pkgdown/docs site:https://smith-group.github.io

Uses libs:
  • c++– GNU Standard C++ Library v3

On CRAN:

Conda:

cpp

1.70 score 4 exports 2 dependencies

Last updated from:4ca92958f3. Checks:15 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK134
linux-devel-x86_64OK147
source / vignettesOK190
linux-release-arm64OK118
linux-release-x86_64OK146
macos-release-arm64OK124
macos-release-x86_64OK386
macos-oldrel-arm64OK153
macos-oldrel-x86_64OK302
windows-devel-arm64OK272
windows-devel-x86_64OK204
windows-release-arm64OK237
windows-release-x86_64OK170
windows-oldrel-x86_64OK160
wasm-releaseOK121

Exports:deep_pickerdeep_picker_1dread_spectrum_1dread_spectrum_2d

Dependencies:RcppRcppEigen