{
  "_id": "6a532bf09b92047c28d56235",
  "Package": "deeppicker",
  "Type": "Package",
  "Title": "R Interface to DEEP Picker for One- and Two-Dimensional Peak\nPicking",
  "Version": "0.5",
  "Authors@R": "c(\nperson(\"Colin\", \"Smith\", email = \"colin.smith@wesleyan.edu\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-4651-167X\")),\nperson(\"Da-Wei\", \"Li\", role = \"aut\", comment = c(ORCID = \"0000-0002-3266-5272\")),\nperson(\"Rafael\", \"Br\\u00fcschweiler\", role = \"aut\", comment = c(ORCID = \"0000-0003-3649-4543\"))\n)",
  "Description": "Provides an R interface to the DEEP Picker neural-network\npeak-picking tools for one- and two-dimensional NMR spectra.\nThe package wraps the peak-picking engines, returning peak\npositions, intensities, line-shape parameters, and confidence\nscores. It also includes readers for supported spectrum\nformats, including NMRPipe, Sparky, TopSpin ASCII, JSON, CSV,\nand ldw files, so spectra can be imported and processed\ndirectly.",
  "License": "GPL-3",
  "URL": "https://github.com/smith-group/deeppicker,\nhttps://smith-group.github.io/deeppicker/",
  "Encoding": "UTF-8",
  "SystemRequirements": "C++17",
  "Config/testthat/edition": "3",
  "RoxygenNote": "7.3.3",
  "Repository": "https://smith-group.r-universe.dev",
  "Date/Publication": "2026-03-13 18:50:54 UTC",
  "RemoteUrl": "https://github.com/smith-group/deeppicker",
  "RemoteRef": "HEAD",
  "RemoteSha": "4ca92958f3170b57e83b902fffa99bcd0f2d84fc",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-07-12 05:45:46 UTC",
    "User": "root"
  },
  "Author": "Colin Smith [aut, cre] (ORCID: <https://orcid.org/0000-0002-4651-167X>),\nDa-Wei Li [aut] (ORCID: <https://orcid.org/0000-0002-3266-5272>),\nRafael Brüschweiler [aut] (ORCID:\n<https://orcid.org/0000-0003-3649-4543>)",
  "Maintainer": "Colin Smith <colin.smith@wesleyan.edu>",
  "_user": "smith-group",
  "_type": "src",
  "_file": "deeppicker_0.5.tar.gz",
  "_fileid": "https://r2.ropensci.org/7537d69150b025d92cda38abe5a5a1ef530ae782b3328e523e54011638e9987e",
  "_filesize": 1194025,
  "_sha256": "7537d69150b025d92cda38abe5a5a1ef530ae782b3328e523e54011638e9987e",
  "_expires": "2026-10-20T05:53:50.000Z",
  "_created": "2026-07-12T05:45:46.000Z",
  "_published": "2026-07-12T05:53:52.069Z",
  "_jobs": [
    {
      "job": 86620389013,
      "time": 163,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8256623173"
    },
    {
      "job": 86620389010,
      "time": 162,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8256622552"
    },
    {
      "job": 86620389019,
      "time": 158,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8256622444"
    },
    {
      "job": 86620389021,
      "time": 173,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8256624005"
    },
    {
      "job": 86620389041,
      "time": 122,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8256617179"
    },
    {
      "job": 86620389042,
      "time": 226,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8256630976"
    },
    {
      "job": 86620389043,
      "time": 121,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8256617112"
    },
    {
      "job": 86620389045,
      "time": 408,
      "config": "macos-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8256655292"
    },
    {
      "job": 86620160686,
      "time": 201,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8256600200"
    },
    {
      "job": 86620389007,
      "time": 135,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8256619141"
    },
    {
      "job": 86620389039,
      "time": 146,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8256620427"
    },
    {
      "job": 86620389024,
      "time": 163,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8256622951"
    },
    {
      "job": 86620389027,
      "time": 168,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8256623387"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/smith-group/actions/runs/29181575437",
  "_status": "success",
  "_upstream": "https://github.com/smith-group/deeppicker",
  "_commit": {
    "id": "4ca92958f3170b57e83b902fffa99bcd0f2d84fc",
    "author": "Colin Smith <colin.smith@wesleyan.edu>",
    "committer": "Colin Smith <colin.smith@wesleyan.edu>",
    "message": "Revert earlier fix attempts for JSON-related warning\n",
    "time": 1773427854
  },
  "_maintainer": {
    "name": "Colin Smith",
    "email": "colin.smith@wesleyan.edu",
    "login": "colinasmith",
    "description": "Protein Dynamics and Design",
    "uuid": 1170378,
    "orcid": "0000-0002-4651-167X"
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.6.0",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppEigen",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "smith-group",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-11",
      "n": 18
    }
  ],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "colinasmith",
      "count": 18,
      "uuid": 1170378
    }
  ],
  "_userbio": {
    "uuid": 33662178,
    "type": "organization",
    "name": "Smith Group",
    "followers": 3
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/deeppicker"
  },
  "_devurl": "https://github.com/smith-group/deeppicker",
  "_pkgdown": "https://smith-group.github.io/deeppicker/",
  "_searchresults": 0,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/deeppicker.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "deep_picker",
    "deep_picker_1d",
    "read_spectrum_1d",
    "read_spectrum_2d"
  ],
  "_help": [
    {
      "page": "deep_picker",
      "title": "Run DEEP Picker on a 2D NMR Spectrum",
      "topics": [
        "deep_picker"
      ]
    },
    {
      "page": "deep_picker_1d",
      "title": "Run DEEP Picker on a 1D NMR Spectrum",
      "topics": [
        "deep_picker_1d"
      ]
    },
    {
      "page": "read_spectrum_1d",
      "title": "Read a 1D Spectrum with DEEP Picker Parsers",
      "topics": [
        "read_spectrum_1d"
      ]
    },
    {
      "page": "read_spectrum_2d",
      "title": "Read a 2D Spectrum with DEEP Picker Parsers",
      "topics": [
        "read_spectrum_2d"
      ]
    }
  ],
  "_readme": "https://github.com/smith-group/deeppicker/raw/HEAD/README.md",
  "_rundeps": [
    "Rcpp",
    "RcppEigen"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_score": 1.6989700043360187,
  "_indexed": true,
  "_nocasepkg": "deeppicker",
  "_universes": [
    "smith-group",
    "colinasmith"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.5",
      "date": "2026-07-12T05:48:35.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "4ca92958f3170b57e83b902fffa99bcd0f2d84fc",
      "fileid": "https://r2.ropensci.org/2fe0dbcee783276dd5a6c5baf8ed35226a5dc6cf9be5ca306d52520fddd6da56",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/smith-group/actions/runs/29181575437"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.5",
      "date": "2026-07-12T05:48:19.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "4ca92958f3170b57e83b902fffa99bcd0f2d84fc",
      "fileid": "https://r2.ropensci.org/ce7baa2c443840ac89bb0ed32da3d51272de3f0d0dd4de0f294212be79bb6f87",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/smith-group/actions/runs/29181575437"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.5",
      "date": "2026-07-12T05:48:29.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "4ca92958f3170b57e83b902fffa99bcd0f2d84fc",
      "fileid": "https://r2.ropensci.org/8f698f23b306e4f4c616cdddd303f5a104494f3a8bf81a446fd6374fa730e968",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/smith-group/actions/runs/29181575437"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.5",
      "date": "2026-07-12T05:48:29.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "4ca92958f3170b57e83b902fffa99bcd0f2d84fc",
      "fileid": "https://r2.ropensci.org/58dacc1f04cbac2f58b96909aa60a57e7e156ac75360f7300e7d3e4ba6029732",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/smith-group/actions/runs/29181575437"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.5",
      "date": "2026-07-12T05:47:48.000Z",
      "arch": "aarch64",
      "commit": "4ca92958f3170b57e83b902fffa99bcd0f2d84fc",
      "fileid": "https://r2.ropensci.org/3b6b5269b7ced7ad38d821bdf9a63fc0282293d3d26defddefb4c81bcf08d4f3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/smith-group/actions/runs/29181575437"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.5",
      "date": "2026-07-12T05:48:42.000Z",
      "arch": "x86_64",
      "commit": "4ca92958f3170b57e83b902fffa99bcd0f2d84fc",
      "fileid": "https://r2.ropensci.org/d7e0e97423a678a05c82a38fa31a601e972dfb83f4e73a2724cf0d876a700522",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/smith-group/actions/runs/29181575437"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.5",
      "date": "2026-07-12T05:47:51.000Z",
      "arch": "aarch64",
      "commit": "4ca92958f3170b57e83b902fffa99bcd0f2d84fc",
      "fileid": "https://r2.ropensci.org/31658e34c533125a0c1757db039d17d69488373c38eb51b26d60e71e5cf6bd4d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/smith-group/actions/runs/29181575437"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.5",
      "date": "2026-07-12T05:50:50.000Z",
      "arch": "x86_64",
      "commit": "4ca92958f3170b57e83b902fffa99bcd0f2d84fc",
      "fileid": "https://r2.ropensci.org/5b14d1421ffe738b56a7386193b605e1f296984dec134bf916154239426e1a30",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/smith-group/actions/runs/29181575437"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.5",
      "date": "2026-07-12T05:48:16.000Z",
      "arch": "emscripten",
      "commit": "4ca92958f3170b57e83b902fffa99bcd0f2d84fc",
      "fileid": "https://r2.ropensci.org/ecb81640587b70b904e448581175f47df6b5365e5bb9f513d2e0745806b1c319",
      "status": "success",
      "buildurl": "https://github.com/r-universe/smith-group/actions/runs/29181575437"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.5",
      "date": "2026-07-12T05:47:27.000Z",
      "arch": "x86_64",
      "commit": "4ca92958f3170b57e83b902fffa99bcd0f2d84fc",
      "fileid": "https://r2.ropensci.org/60126eec36d763f8ca580437f20592de2bdb46deb6ee854c1eb242326eec8ac4",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/smith-group/actions/runs/29181575437"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.5",
      "date": "2026-07-12T05:47:32.000Z",
      "arch": "x86_64",
      "commit": "4ca92958f3170b57e83b902fffa99bcd0f2d84fc",
      "fileid": "https://r2.ropensci.org/fc21bfe05d9af8faf893e68cfe60a07f597237d4a6a5ad54e5daa9c1dd24a0f2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/smith-group/actions/runs/29181575437"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.5",
      "date": "2026-07-12T05:47:27.000Z",
      "arch": "x86_64",
      "commit": "4ca92958f3170b57e83b902fffa99bcd0f2d84fc",
      "fileid": "https://r2.ropensci.org/7d7e2890d04f4d87dd375199d9c9b33dbe8ab782467315ed5ecf06c922dee009",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/smith-group/actions/runs/29181575437"
    }
  ]
}