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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "deeppicker" in publications use:'
type: software
license: GPL-3.0-only
title: 'deeppicker: R Interface to DEEP Picker for One- and Two-Dimensional Peak Picking'
version: '0.5'
doi: 10.1038/s41467-021-25496-5
identifiers:
- type: doi
  value: 10.32614/CRAN.package.deeppicker
abstract: Provides an R interface to the DEEP Picker neural-network peak-picking tools
  for one- and two-dimensional NMR spectra. The package wraps the peak-picking engines,
  returning peak positions, intensities, line-shape parameters, and confidence scores.
  It also includes readers for supported spectrum formats, including NMRPipe, Sparky,
  TopSpin ASCII, JSON, CSV, and ldw files, so spectra can be imported and processed
  directly.
authors:
- family-names: Smith
  given-names: Colin
  email: colin.smith@wesleyan.edu
  orcid: https://orcid.org/0000-0002-4651-167X
- family-names: Li
  given-names: Da-Wei
  orcid: https://orcid.org/0000-0002-3266-5272
- family-names: Brüschweiler
  given-names: Rafael
  orcid: https://orcid.org/0000-0003-3649-4543
preferred-citation:
  type: article
  title: DEEP Picker is a Deep Neural Network for Accurate Deconvolution of Complex
    Two-Dimensional NMR Spectra
  authors:
  - family-names: Li
    given-names: Da-Wei
    orcid: https://orcid.org/0000-0002-3266-5272
  - family-names: Hansen
    given-names: Alexandar L.
  - family-names: Yuan
    given-names: Chunhua
  - family-names: Bruschweiler-Li
    given-names: Lei
  - family-names: Brüschweiler
    given-names: Rafael
    orcid: https://orcid.org/0000-0003-3649-4543
  journal: Nature Communications
  year: '2021'
  volume: '12'
  doi: 10.1038/s41467-021-25496-5
  start: '5229'
repository: https://smith-group.r-universe.dev
repository-code: https://github.com/smith-group/deeppicker
commit: 4ca92958f3170b57e83b902fffa99bcd0f2d84fc
url: https://smith-group.github.io/deeppicker/
date-released: '2026-03-13'
contact:
- family-names: Smith
  given-names: Colin
  email: colin.smith@wesleyan.edu
  orcid: https://orcid.org/0000-0002-4651-167X